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S. No. Trans. Project ID Transcriptome Exp. ID Plant Image Plant Name Variety Family Name Sample/ Tissue Study Title Sequencing Platform Sequencing Library Bases No. (G) Submitted By Institute City Country Complete Transcriptome Report
1 PTP001 PTE002 Andrographis paniculata CIM-Megha Acanthaceae Root De novo sequencing and comparative analysis of leaf and root transcriptomes of Andrographis paniculata. Illumina HiSeq 2000 Paired 7.9G Dr. Sumit Ghosh Central Institute of Medicinal and Aromatic Plants Lucknow India View
2 PTP002 PTE003 Andrographis paniculata CIM-Megha Acanthaceae Seed pod De novo sequencing and comparative analysis of leaf and root transcriptomes of Andrographis paniculata. Illumina HiSeq 4000 Paired 17.2G Dr. Sumit Ghosh Central Institute of Medicinal and Aromatic Plants Lucknow India View
3 PTP001 PTE001 Andrographis paniculata CIM-Megha Acanthaceae Leaf De novo sequencing and comparative analysis of leaf and root transcriptomes of Andrographis paniculata. Illumina HiSeq 2000 Paired 10.3G Dr. Sumit Ghosh Central Institute of Medicinal and Aromatic Plants Lucknow India View
4 PTP003 PTE008 Arabidopsis thaliana NA Brassicaceae Whole seedling Reference-based Transcriptome Analysis of Arabidopsis samples Illumina NovaSeq 6000 Paired 4.8G Dr. Rakesh Kumar Shukla CSIR-Central Institute of Medicinal and Aromatic Plants Lucknow India View
5 PTP003 PTE009 Arabidopsis thaliana NA Brassicaceae Whole seedling Reference-based Transcriptome Analysis of Arabidopsis samples Illumina NovaSeq 6000 Paired 7.3G Dr. Rakesh Kumar Shukla CSIR-Central Institute of Medicinal and Aromatic Plants Lucknow India View
6 PTP002 PTE004 Andrographis paniculata CIM-Megha Acanthaceae Leaf De novo sequencing and comparative analysis of leaf and root transcriptomes of Andrographis paniculata. Illumina HiSeq 4000 Paired 16.5G Dr. Sumit Ghosh Central Institute of Medicinal and Aromatic Plants Lucknow India View
7 PTP003 PTE010 Arabidopsis thaliana MaRAP2 OE Brassicaceae Whole seedling Reference-based Transcriptome Analysis of Arabidopsis samples Illumina NovaSeq 6000 Paired 8.2G Dr. Rakesh Kumar Shukla CSIR-Central Institute of Medicinal and Aromatic Plants Lucknow India View
8 PTP003 PTE011 Arabidopsis thaliana MaRAP2 OE Brassicaceae Whole seedling Reference-based Transcriptome Analysis of Arabidopsis samples Illumina NovaSeq 6000 Paired 8G Dr. Rakesh Kumar Shukla CSIR-Central Institute of Medicinal and Aromatic Plants Lucknow India View
9 PTP002 PTE005 Andrographis paniculata CIM-Megha Acanthaceae Root De novo sequencing and comparative analysis of leaf and root transcriptomes of Andrographis paniculata. Illumina HiSeq 4000 Paired 16.6G Dr. Sumit Ghosh Central Institute of Medicinal and Aromatic Plants Lucknow India View
10 PTP003 PTE012 Arabidopsis thaliana MaMYB OE Brassicaceae Whole seedling Reference-based Transcriptome Analysis of Arabidopsis samples Illumina NovaSeq 6000 Paired 4.8G Dr. Rakesh Kumar Shukla CSIR-Central Institute of Medicinal and Aromatic Plants Lucknow India View
11 PTP003 PTE013 Arabidopsis thaliana MaMYB OE Brassicaceae Whole seedling Reference-based Transcriptome Analysis of Arabidopsis samples Illumina NovaSeq 6000 Paired 8.2G Dr. Rakesh Kumar Shukla CSIR-Central Institute of Medicinal and Aromatic Plants Lucknow India View
12 PTP004 PTE014 Arabidopsis thaliana Col. 0 Brassicaceae Flower & silique Tissue specific transcriptome analysis of Arabidopsis thaliana Illumina HiSeq 4000 Paired 6.9G Dr. Rakesh Kumar Shukla CSIR-Central Institute of Medicinal and Aromatic Plants Lucknow India View
13 PTP004 PTE015 Arabidopsis thaliana Col. 0 Brassicaceae Flower & silique Tissue specific transcriptome analysis of Arabidopsis thaliana Illumina HiSeq 4000 Paired 9.1G Dr. Rakesh Kumar Shukla CSIR-Central Institute of Medicinal and Aromatic Plants Lucknow India View
14 PTP005 PTE016 Arabidopsis thaliana Col. 0 Sponge (MIMIC858) Brassicaceae Stem Functional characterization of miR858 from Arabidopsis thaliana Illumina HiSeq 2500 Single 4G Dr. Prabodh Kumar Trivedi CSIR-Central Institute of Medicinal and Aromatic Plants Lucknow India View
15 PTP002 PTE006 Andrographis paniculata CIM-Megha Acanthaceae Stem De novo sequencing and comparative analysis of leaf and root transcriptomes of Andrographis paniculata. Illumina HiSeq 4000 Paired 15.1G Dr. Sumit Ghosh Central Institute of Medicinal and Aromatic Plants Lucknow India View
16 PTP005 PTE017 Arabidopsis thaliana Col. 0 Foldback (miR858) Brassicaceae Stem Functional characterization of miR858 from Arabidopsis thaliana Illumina HiSeq 2500 Single 2G Dr. Prabodh Kumar Trivedi CSIR-Central Institute of Medicinal and Aromatic Plants Lucknow India View
17 PTP002 PTE007 Andrographis paniculata CIM-Megha Acanthaceae Flower De novo sequencing and comparative analysis of leaf and root transcriptomes of Andrographis paniculata. Illumina HiSeq 4000 Paired 18.3G Dr. Sumit Ghosh Central Institute of Medicinal and Aromatic Plants Lucknow India View
18 PTP038 PTE123 Nepeta cataria Leaf Lamiaceae De novo transcriptome assembly of Nepeta cataria Illumina NovaSeq 6000 Paired 4.5G Dr. Gunjan Tiwari Central Institute of Medicinal and Aromatic Plants Lucknow India View
19 PTP038 PTE124 Nepeta cataria Leaf Lamiaceae De novo transcriptome assembly of Nepeta cataria Illumina NovaSeq 6000 Paired 5.3G Dr. Gunjan Tiwari Central Institute of Medicinal and Aromatic Plants Lucknow India View
20 PTP038 PTE125 Nepeta cataria Leaf Lamiaceae De novo transcriptome assembly of Nepeta cataria Illumina NovaSeq 6000 Paired 6.4G Dr. Gunjan Tiwari Central Institute of Medicinal and Aromatic Plants Lucknow India View
21 PTP038 PTE127 Nepeta cataria Leaf Lamiaceae Line2 De novo transcriptome assembly of Nepeta cataria Illumina NovaSeq 6000 Paired 5.5G Dr. Gunjan Tiwari Central Institute of Medicinal and Aromatic Plants Lucknow India View
22 PTP038 PTE128 Nepeta cataria Leaf Lamiaceae De novo transcriptome assembly of Nepeta cataria Illumina NovaSeq 6000 Paired 8.5G Dr. Gunjan Tiwari Central Institute of Medicinal and Aromatic Plants Lucknow India View
23 PTP038 PTE129 Nepeta cataria Leaf Lamiaceae De novo transcriptome assembly of Nepeta cataria Illumina NovaSeq 6000 Paired 4.5G Dr. Gunjan Tiwari Central Institute of Medicinal and Aromatic Plants Lucknow India View
24 PTP040 PTE133 Canabis Sativa CIM-CS-64 Cannabaceae inflorescence RNA-Seq data analysis of Canabis sativa Paired-end Dr. Birendra Kumar CSIR-Central Institute of Medicinal and Aromatic Plants Lucknow India View
25 PTP040 PTE134 Canabis Sativa CIM-CS-64 Cannabaceae Leaf + inflorescence RNA-Seq data analysis of Canabis sativa Paired-end Dr. Birendra Kumar CSIR-Central Institute of Medicinal and Aromatic Plants Lucknow India View
26 PTP040 PTE135 Canabis Sativa CIM-CS-64 Cannabaceae Leaf RNA-Seq data analysis of Canabis sativa Paired-end Dr. Birendra Kumar CSIR-Central Institute of Medicinal and Aromatic Plants Lucknow India View
27 PTP040 PTE136 Canabis Sativa CIM-CS-39 Cannabaceae inflorescence RNA-Seq data analysis of Canabis sativa Paired-end Dr. Birendra Kumar CSIR-Central Institute of Medicinal and Aromatic Plants Lucknow India View
28 PTP040 PTE137 Canabis Sativa CIM-CS-39 Cannabaceae Leaf + inflorescence RNA-Seq data analysis of Canabis sativa Paired-end Dr. Birendra Kumar CSIR-Central Institute of Medicinal and Aromatic Plants Lucknow India View
29 PTP040 PTE138 Canabis Sativa CIM-CS-39 Cannabaceae Leaf RNA-Seq data analysis of Canabis sativa Paired-end Dr. Birendra Kumar CSIR-Central Institute of Medicinal and Aromatic Plants Lucknow India View
30 PTP039 PTE130 Rauvolfia serpentina Wild type Apocynaceae Young leaf De novo transcriptome analysis of Rauvolfia serpentina Illumina Novaseq X Paired 4.5G Dr. Prema G. Vasudev CSIR-Central Institute Of Medicinal And Aromatic Plants Lucknow India View
31 PTP039 PTE131 Rauvolfia serpentina Wild type Apocynaceae Mature leaf De novo transcriptome analysis of Rauvolfia serpentina Illumina Novaseq X Paired 4.8G Dr. Prema G. Vasudev CSIR-Central Institute Of Medicinal And Aromatic Plants Lucknow India View
32 PTP039 PTE132 Rauvolfia serpentina Wild type Apocynaceae Mature leaf De novo transcriptome analysis of Rauvolfia serpentina Illumina Novaseq X Paired 4.5G Dr. Prema G. Vasudev CSIR-Central Institute Of Medicinal And Aromatic Plants Lucknow India View
33 PTP032 PTE084 Withania somnifera Nagori (Chetak) Solanaceae Central part of root inside cambium (Rep3) Withania somnifera cultivar Nagori (chetak) root transcriptome or gene expression Illumina NovaSeq 6000 Paired 5.6G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
34 PTP032 PTE085 Withania somnifera Nagori (Chetak) Solanaceae Central part of root inside cambium (Rep2) Withania somnifera cultivar Nagori (chetak) root transcriptome or gene expression Illumina NovaSeq 6000 Paired 7.8G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
35 PTP032 PTE086 Withania somnifera Nagori (Chetak) Solanaceae Central part of root inside cambium (Rep1) Withania somnifera cultivar Nagori (chetak) root transcriptome or gene expression Illumina NovaSeq 6000 Paired 5.8G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
36 PTP032 PTE087 Withania somnifera Nagori (Chetak) Solanaceae Root part containing cell layers outside cambium (Rep3) Withania somnifera cultivar Nagori (chetak) root transcriptome or gene expression Illumina NovaSeq 6000 Paired 5.5G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
37 PTP032 PTE088 Withania somnifera Nagori (Chetak) Solanaceae Root part containing cell layers outside cambium (Rep2) Withania somnifera cultivar Nagori (chetak) root transcriptome or gene expression Illumina NovaSeq 6000 Paired 5.4G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
38 PTP032 PTE089 Withania somnifera Nagori (Chetak) Solanaceae Root part containing cell layers outside cambium (Rep1) Withania somnifera cultivar Nagori (chetak) root transcriptome or gene expression Illumina NovaSeq 6000 Paired 6G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
39 PTP033 PTE090 Withania somnifera Nagori (Chetak) Solanaceae whole Root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 3.7G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
40 PTP033 PTE091 Withania somnifera Nagori (Chetak) Solanaceae whole Root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 4.9G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
41 PTP033 PTE092 Withania somnifera Nagori (Chetak) Solanaceae whole Root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 4.3G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
42 PTP033 PTE093 Withania somnifera Nagori (Chetak) Solanaceae whole Root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 4.G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
43 PTP033 PTE094 Withania somnifera Nagori (Chetak) Solanaceae whole Root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 6.6G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
44 PTP033 PTE095 Withania somnifera Nagori (Chetak) Solanaceae whole Root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 5.3G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
45 PTP033 PTE096 Withania somnifera Nagori (Chetak) Solanaceae whole Root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 4.5G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
46 PTP033 PTE097 Withania somnifera Poshita Solanaceae 2/4th portion of root from base Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 3.7G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
47 PTP033 PTE098 Withania somnifera Poshita Solanaceae 2/4th portion of root from base Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 3.5G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
48 PTP033 PTE099 Withania somnifera Poshita Solanaceae 2/4th portion of root from base Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 3.6G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
49 PTP033 PTE0100 Withania somnifera Poshita Solanaceae whole Root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 3.4G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
50 PTP033 PTE0101 Withania somnifera Poshita Solanaceae whole Root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 4.9G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
51 PTP033 PTE0102 Withania somnifera Poshita Solanaceae whole Root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 4.1G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
52 PTP033 PTE0103 Withania somnifera Poshita Solanaceae whole Root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 5.3G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
53 PTP033 PTE0104 Withania somnifera Poshita Solanaceae whole Root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 6.6G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
54 PTP033 PTE0105 Withania somnifera Poshita Solanaceae whole Root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 4.7G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
55 PTP033 PTE0106 Withania somnifera Poshita Solanaceae whole Root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 4.8G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
56 PTP033 PTE0107 Withania somnifera Poshita Solanaceae 2/4th portion of root from base Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 4.4G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
57 PTP033 PTE0108 Withania somnifera Poshita Solanaceae 2/4th portion of root from base Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 4G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
58 PTP033 PTE0109 Withania somnifera Poshita Solanaceae 2/4th portion of root from base Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 3.2G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
59 PTP033 PTE0110 Withania somnifera Poshita Solanaceae Whole root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 4G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
60 PTP033 PTE0111 Withania somnifera Nagori (chetak) Solanaceae Whole root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 4.9G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
61 PTP033 PTE0112 Withania somnifera Nagori (chetak) Solanaceae Whole root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 3.8G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
62 PTP033 PTE0113 Withania somnifera Nagori (chetak) Solanaceae Whole root Withania somnifera cultivar:Nagori (chetak) Raw sequence reads Illumina NovaSeq 6000 Paired 4.3G  Dr. Pradipto Mukhopadhyay CSIR-Central Instittute of Medicinal and Aromatic Plants Lucknow India View
63 PTP034 PTE0114 Withania somnifera CWS7xCWS11 Solanaceae whole plant RNA seq analysis of CWS11x CWS74 F1hybrid of different Ecotype of Ashwagandha (Withania somnifera) genotypically adapted to specific environmental conditions Illumina HiSeq 4000 Paired 8.8G NA View
64 PTP034 PTE0115 Withania somnifera CWS11XCWS7 Solanaceae whole plant RNA seq analysis of CWS11x CWS74 F1hybrid of different Ecotype of Ashwagandha (Withania somnifera) genotypically adapted to specific environmental conditions Illumina HiSeq 4000 Paired 8.2G NA View
65 PTP034 PTE0116 Withania somnifera CWS11XCWS74 Solanaceae whole plant RNA seq analysis of CWS11x CWS74 F1hybrid of different Ecotype of Ashwagandha (Withania somnifera) genotypically adapted to specific environmental conditions Illumina HiSeq 4000 Paired 6.9G NA View
66 PTP035 PTE0117 Withania somnifera Nagouri ecotype Solanaceae Leaf RNA seq analysis of CWS11, an annual, Nagouri ecotype also known as Ashwagandha of commerce (Withania somnifera) NextSeq 500 Paired 10.2G NA View
67 PTP035 PTE0118 Withania somnifera Wild, perennial Ecotype Solanaceae Leaf RNA seq analysis of CWS11, an annual, Nagouri ecotype also known as Ashwagandha of commerce (Withania somnifera) NextSeq 500 Paired 9.8G NA View
68 PTP036 PTE119 Withania somnifera NMITLI-118 Solanaceae Leaf Transcriptome analysis of leaf and root tissues of NMITLI-118 chemotype of Withania somnifera (Indian ginseng) using 454-Sequencing Platform- Leaf 454 GS FLX Titanium Paired 267.1M Prabodh Kumar Trivedi CSIR-NBRI Lucknow India View
69 PTP036 PTE120 Withania somnifera NMITLI-118 Solanaceae Root Transcriptome analysis of leaf and root tissues of NMITLI-118 chemotype of Withania somnifera (Indian ginseng) using 454-Sequencing Platform- Leaf 454 GS FLX Titanium Paired 295.1M Prabodh Kumar Trivedi CSIR-NBRI Lucknow India View
70 PTP037 PTE121 Withania somnifera NMITLI-135 Solanaceae Leaf Transcriptome analysis of leaf and root tissues of NMITLI-135 chemotype of Withania somnifera (Indian ginseng) using 454-Sequencing Platform- root sample 454 GS FLX Titanium Single 276.3M Prabodh Kumar Trivedi CSIR-NBRI Lucknow India View
71 PTP037 PTE122 Withania somnifera NMITLI-135 Solanaceae Root Transcriptome analysis of leaf and root tissues of NMITLI-135 chemotype of Withania somnifera (Indian ginseng) using 454-Sequencing Platform- root sample 454 GS FLX Titanium Single 234M Prabodh Kumar Trivedi CSIR-NBRI Lucknow India View