Primary Details
Plant Classification
|
|
|
| Kingdom |
Plantae |
| Phylum |
Streptophyta |
| Class |
Magnolipsida |
| Order |
Lamiales |
| Family |
Acanthaceae |
| Genus |
Andrographis |
| Species |
paniculata |
| Variety/Line/Chemotype |
|
Transcriptome Details
| Sample Tissue |
Leaf |
| Variety |
CIM-Megha |
| Study Title |
De novo sequencing and comparative analysis of leaf and root transcriptomes of Andrographis paniculata. |
| Description |
Comparative transcriptomics analysis of leaf and root samples of Andrographis paniculata. |
| Sequencing Platform |
Illumina HiSeq 4000 |
| Sequencing Strategy |
RNA-Seq |
| Sequencing Library |
Paired |
| Experiment Type |
NA |
| Replicate Number |
0 |
| Total Replicates |
0 |
| Merged replicated |
0 |
| Library Name |
1 |
| Selection Method |
PCR |
| Number of run |
1 |
| Spots No |
55,156,880 |
| Bases no |
16.5G |
| Spot Length |
55.2M |
Raw Reads Downlaod (.fastq)
Download Raw Reads (RNA-Seq) from original source (SRA, NCBI, USA/ENA/Other DBs)
| RNA-Seq Reads File 1 (Forward) |
|
| RNA-Seq Reads File 2 (Reverse) |
|
Other Related Entries
| Project ID |
Experiment ID |
Plant Name |
Sample/Tissue |
Exp. Type |
Replicate No. |
Total Replicates No. |
Merged Assembly (Replicates) |
| PTP001 |
EXP001 |
Andrographis paniculata |
Leaf |
NA |
NA |
NA |
NA |
| PTP001 |
EXP002 |
Andrographis paniculata |
Root |
NA |
NA |
NA |
NA |
| PTP001 |
PTE001 |
Andrographis paniculata |
Leaf |
Untreated |
1 |
1 |
0 |
| PTP001 |
PTE002 |
Andrographis paniculata |
Root |
Untreated |
1 |
1 |
0 |
| PTP001 |
PTE126 |
Andrographis paniculata |
Seed pod |
Untreated |
1 |
1 |
0 |
| PTP001 |
PTE127 |
Andrographis paniculata |
Leaf |
NA |
0 |
0 |
0 |
| PTP001 |
PTE128 |
Andrographis paniculata |
Root |
NA |
0 |
0 |
0 |
| PTP001 |
PTE129 |
Andrographis paniculata |
Stem |
NA |
0 |
0 |
0 |
| PTP001 |
PTE129 |
Andrographis paniculata |
Flower |
NA |
0 |
0 |
0 |
| PTP001 |
PTE001 |
Andrographis paniculata |
Leaf |
Untreated |
1 |
1 |
0 |
