Primary Details
| Project ID | PTP013 |
| Transcriptome Exp. ID | PTE044 |
| Plant Name | Cymbopogon flexuosus |
| Genome ID |
Plant Classification
|
||
| Kingdom | Plantae | |
| Phylum | Streptophyta | |
| Class | Magnolipsida | |
| Order | Poales | |
| Family | Poaceae | |
| Genus | Cymbopogon | |
| Species | flexuosus | |
| Variety | CIM-Krishna |
Transcriptome Details
Sample Tissue
Mature leaf
Line/Chemotype/Cultivar
CIM-Krishna
Study Title
Cymbopogon flexuosus cultivar:Krishna Transcriptome or Gene expression
Description
Mining of genes involved in essential oil biosynthesis from Cymbopogon sp
Sequencing Platform
Illumina HiSeq 2000
Sequencing Strategy
RNA-Seq
Sequencing Library
Paired
Experiment Type
Control
Replicate Number
1
Total Replicates
1
Merged replicated
1
Library Name
CF
Selection Method
cDNA
Number of run
1
Spots No
26936556
Bases no
5.4
Spot Length
202
Submitted By
Dr. Dinesh Nagegowda
Affliated Institute
CSIR-CIMAP
Country
India
State
Uttar Pradesh
City
Lucknow
SRA (NCBI) Project ID
SRA (NCBI) Experiment ID
SRA (NCBI) Sample ID
SRA (NCBI) Run ID
Other Related Entries
| Project ID | Experiment ID | Plant Name | Sample/Tissue | Exp. Type | Replicate No. | Total Replicates No. | Merged Assembly (Replicates) | DEGs (Pair) |
|---|---|---|---|---|---|---|---|---|
| PTP013 | PTE044 | Cymbopogon flexuosus | Mature leaf | Control | 1 | 1 | 1 | - |
Reference/Publication Details
| Sr. No | Publication details |
|---|---|
| 1 | Meena S, Kumar SR, Venkata Rao DK, Dwivedi V, Shilpashree HB, Rastogi S, Shasany AK, Nagegowda DA. De Novo Sequencing and Analysis of Lemongrass Transcriptome Provide First Insights into the Essential Oil Biosynthesis of Aromatic Grasses. Front Plant Sci. 2016 Jul 28;7:1129. doi: 10.3389/fpls.2016.01129. PMID: 27516768; PMCID: PMC4963619. |