Primary Details
| Project ID | PTP021 |
| Transcriptome Exp. ID | PTE057 |
| Plant Name | Lagerstroemia speciosa |
| Genome ID |
Plant Classification
|
||
| Kingdom | Plantae | |
| Phylum | Streptophyta | |
| Class | Magnolipsida | |
| Order | Myrtales | |
| Family | Lythraceae | |
| Genus | Lagerstroemia | |
| Species | speciosa | |
| Variety | NA |
Transcriptome Details
Sample Tissue
Leaf
Line/Chemotype/Cultivar
NA
Study Title
Lagerstroemia speciosa Transcriptome or Gene expression
Description
Transcriptome analysis of leaf sample of Lagerstroemia speciosa.
Sequencing Platform
Illumina NextSeq 500
Sequencing Strategy
RNA-Seq
Sequencing Library
Paired
Experiment Type
Control
Replicate Number
1
Total Replicates
1
Merged replicated
1
Library Name
NA
Selection Method
PolyA
Number of run
1
Spots No
32940513
Bases no
9.9
Spot Length
302
Submitted By
Dr. Sumit Ghosh
Affliated Institute
CSIR-CIMAP
Country
India
State
Uttar Pradesh
City
Lucknow
SRA (NCBI) Project ID
SRA (NCBI) Experiment ID
SRA (NCBI) Sample ID
SRA (NCBI) Run ID
Other Related Entries
| Project ID | Experiment ID | Plant Name | Sample/Tissue | Exp. Type | Replicate No. | Total Replicates No. | Merged Assembly (Replicates) | DEGs (Pair) |
|---|---|---|---|---|---|---|---|---|
| PTP021 | PTE057 | Lagerstroemia speciosa | Leaf | Control | 1 | 1 | 1 | - |
Reference/Publication Details
| Sr. No | Publication details |
|---|---|
| 1 | Sandeep, , Misra, R.C., Chanotiya, C.S., Mukhopadhyay, P. and Ghosh, S. (2019), Oxidosqualene cyclase and CYP716 enzymes contribute to triterpene structural diversity in the medicinal tree banaba. New Phytol, 222: 408-424. https://doi.org/10.1111/nph.15606 |