Primary Details
| Project ID | PTP021 |
| Transcriptome Exp. ID | PTE057 |
| Plant Name | Lagerstroemia speciosa |
| Genome ID |
Plant Classification
|
||
| Kingdom | Plantae | |
| Phylum | Streptophyta | |
| Class | Magnolipsida | |
| Order | Myrtales | |
| Family | Lythraceae | |
| Genus | Lagerstroemia | |
| Species | speciosa | |
| Variety | NA |
Transcriptome Details
Sample Tissue
Leaf
Line/Chemotype/Cultivar
NA
Study Title
Lagerstroemia speciosa Transcriptome or Gene expression
Description
Transcriptome analysis of leaf sample of Lagerstroemia speciosa.
Sequencing Platform
Illumina NextSeq 500
Sequencing Strategy
RNA-Seq
Sequencing Library
Paired
Experiment Type
Control
Replicate Number
1
Total Replicates
1
Merged replicated
1
Library Name
NA
Selection Method
PolyA
Number of run
1
Spots No
32940513
Bases no
9.9
Spot Length
302
Submitted By
Dr. Sumit Ghosh
Affliated Institute
CSIR-Central Institute Of Medicinal And Aromatic Plants
Country
India
State
Uttar Pradesh
City
Lucknow
SRA (NCBI) Project ID
SRA (NCBI) Experiment ID
SRA (NCBI) Sample ID
SRA (NCBI) Run ID
Other Related Entries
| Project ID | Experiment ID | Plant Name | Sample/Tissue | Exp. Type | Replicate No. | Total Replicates No. | Merged Assembly (Replicates) | DEGs (Pair) |
|---|---|---|---|---|---|---|---|---|
| PTP021 | PTE057 | Lagerstroemia speciosa | Leaf | Control | 1 | 1 | 1 | - |
Reference/Publication Details
| Sr. No | Publication details |
|---|---|
| 1 | Sandeep, , Misra, R.C., Chanotiya, C.S., Mukhopadhyay, P. and Ghosh, S. (2019), Oxidosqualene cyclase and CYP716 enzymes contribute to triterpene structural diversity in the medicinal tree banaba. New Phytol, 222: 408-424. https://doi.org/10.1111/nph.15606 |