Transcriptome



Primary Details

Project ID PTP004
Transcriptome Exp. ID PTE014
Plant Name Arabidopsis thaliana
Genome ID

Plant Classification

Kingdom Plantae
Phylum Streptophyta
Class Magnolipsida
Order Brassicales
Family Brassicaceae
Genus Arabidopsis
Species thaliana
Variety

Transcriptome Details

Sample Tissue

Flower & silique

Line/Chemotype/Cultivar

Col. 0

Study Title

Tissue specific transcriptome analysis of Arabidopsis thaliana

Description

Tissue specific transcriptome analysis of Arabidopsis thaliana

Sequencing Platform

Illumina HiSeq 4000

Sequencing Strategy

RNA-Seq

Sequencing Library

Paired

Experiment Type

Replicate Number

Total Replicates

Merged replicated

Library Name

2

Selection Method

PCR

Number of run

Spots No

23127398

Bases no

6.9G

Spot Length

300

Submitted By

Dr. Rakesh Kumar Shukla

Affliated Institute

CSIR-Central Institute of Medicinal and Aromatic Plants

Country

India

State

Uttar Pradesh

City

Lucknow

Raw Reads Downlaod (.fastq)

Download Raw RNA-Seq Data (.fastq)
RNA-Seq Reads File 1 (Forward) Open Link
RNA-Seq Reads File 2 (Reverse) Open Link

Other Related Entries

Project ID Experiment ID Plant Name Sample/Tissue Exp. Type Replicate No. Total Replicates No. Merged Assembly (Replicates) DEGs (Pair)
PTP004 PTE014 Arabidopsis thaliana Flower & silique -
PTP004 PTE015 Arabidopsis thaliana Flower & silique -