Primary Details
| Project ID | PTP023 |
| Transcriptome Exp. ID | PTE059 |
| Plant Name | Ocimum tenuiflorum |
| Genome ID | GEN1 |
Plant Classification
|
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| Kingdom | Plantae | |
| Phylum | Streptophyta | |
| Class | Magnolipsida | |
| Order | Lamiales | |
| Family | Lamiaceae | |
| Genus | Ocimum | |
| Species | tenuiflorum | |
| Variety | CIM-Ayu |
Transcriptome Details
Sample Tissue
Leaf
Line/Chemotype/Cultivar
CIM-Ayu
Study Title
Ocimum tenuiflorum Transcriptome or Gene expression
Description
De novo sequencing and characterization of Ocimum sanctum L.transcriptome for better understanding of secondary metabolism pathways in the plants.
Sequencing Platform
Illumina HiSeq 2000
Sequencing Strategy
RNA-Seq
Sequencing Library
Paired
Experiment Type
Control
Replicate Number
1
Total Replicates
1
Merged replicated
1
Library Name
002
Selection Method
PolyA
Number of run
1
Spots No
47445385
Bases no
9.5
Spot Length
200
Submitted By
Dr. Ajit Shasany
Affliated Institute
CSIR-CIMAP
Country
India
State
Uttar Pradesh
City
Lucknow
SRA (NCBI) Project ID
SRA (NCBI) Experiment ID
SRA (NCBI) Sample ID
SRA (NCBI) Run ID
Other Related Entries
| Project ID | Experiment ID | Plant Name | Sample/Tissue | Exp. Type | Replicate No. | Total Replicates No. | Merged Assembly (Replicates) | DEGs (Pair) |
|---|---|---|---|---|---|---|---|---|
| PTP023 | PTE059 | Ocimum tenuiflorum | Leaf | Control | 1 | 1 | 1 | - |