|
Menu

Transcriptome

  • Home
  • Transcriptome


Primary Details

Project ID PTP030
Transcriptome Exp. ID PTE080
Plant Name Terminalia arjuna
Genome ID

Plant Classification

Kingdom Plantae
Phylum Streptophyta
Class Magnolipsida
Order Myrtales
Family Combretaceae
Genus Terminalia
Species arjuna
Variety NA

Transcriptome Details

Sample Tissue

Bark

Line/Chemotype/Cultivar

NA

Study Title

Terminalia arjuna Transcriptome or Gene expression

Description

Transcriptome sequencing and analysis of leaf and bark samples of Terminalia arjuna

Sequencing Platform

NextSeq 500

Sequencing Strategy

Tn-Seq

Sequencing Library

Single

Experiment Type

Control

Replicate Number

1

Total Replicates

1

Merged replicated

1

Library Name

Bark_Terminalia arjuna

Selection Method

PCR

Number of run

1

Spots No

41516443

Bases no

12.5

Spot Length

300

Submitted By

Dr. Sumit Ghosh

Affliated Institute

CSIR-Central Institute of Medicinal and Aromatic Plants

Country

India

State

Uttar Pradesh

City

Lucknow

SRA (NCBI) Project ID

PRJNA374620

SRA (NCBI) Experiment ID

SRX2563726

SRA (NCBI) Sample ID

SAMN06329632

SRA (NCBI) Run ID

SRR5258730

Raw Reads Downlaod (.fastq)

Download Raw Reads (RNA-Seq) from original source (SRA, NCBI, USA/ENA/Other DBs)
RNA-Seq Reads File 1 (Forward) Open Link
RNA-Seq Reads File 2 (Reverse) Open Link

Other Related Entries

Project ID Experiment ID Plant Name Sample/Tissue Exp. Type Replicate No. Total Replicates No. Merged Assembly (Replicates) DEGs (Pair)
PTP030 PTE080 Terminalia arjuna Bark Control 1 1 1 -
PTP030 PTE081 Terminalia arjuna Leaf Control 1 1 1 -