Plant Classification
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| Kingdom | Plantae | |
| Phylum | Streptophyta | |
| Class | Magnolipsida | |
| Order | Lamiales | |
| Family | Lamiaceae | |
| Genus | Mentha | |
| Species | arvensis | |
| Variety | CIM-Saksham |
Transcriptome Details
Sample Tissue
Leaf
Line/Chemotype/Cultivar
CIM-Saksham
Study Title
Mentha arvensis Transcriptome
Description
Transcriptome analysis of Mentha arvensis
Sequencing Platform
Illumina HiSeq 2500
Sequencing Strategy
RNA-Seq
Sequencing Library
Paired
Experiment Type
Control
Replicate Number
1
Total Replicates
1
Merged replicated
1
Library Name
lib5
Selection Method
cDNA
Number of run
1
Spots No
82084398
Bases no
16.4
Spot Length
202
Submitted By
Dr. Ajit Shasany
Affliated Institute
CSIR-CIMAP
Country
India
State
Uttar Pradesh
City
Lucknow
SRA (NCBI) Project ID
SRA (NCBI) Experiment ID
SRA (NCBI) Sample ID
SRA (NCBI) Run ID
Other Related Entries
| Project ID | Experiment ID | Plant Name | Sample/Tissue | Exp. Type | Replicate No. | Total Replicates No. | Merged Assembly (Replicates) | DEGs (Pair) |
|---|---|---|---|---|---|---|---|---|
| PTP018 | PTE053 | Mentha Arvensis | Leaf | Control | 1 | 1 | 1 | - |
Reference/Publication Details
| Sr. No | Publication details |
|---|---|
| 1 | Akhtar, M.Q., Qamar, N., Yadav, P., Kulkarni, P., Kumar, A. and Shasany, A.K. (2017), Comparative glandular trichome transcriptome-based gene characterization reveals reasons for differential (−)-menthol biosynthesis in Mentha species. Physiol Plantarum, 160: 128-141. https://doi.org/10.1111/ppl.12550 |