Plant Classification
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| Kingdom | Plantae | |
| Phylum | Streptophyta | |
| Class | Magnolipsida | |
| Order | Lamiales | |
| Family | Lamiaceae | |
| Genus | Mentha | |
| Species | arvensis | |
| Variety | CIM-Saksham |
Transcriptome Details
Sample Tissue
Leaf
Line/Chemotype/Cultivar
CIM-Saksham
Study Title
Mentha arvensis Transcriptome
Description
Transcriptome analysis of Mentha arvensis
Sequencing Platform
Illumina HiSeq 2500
Sequencing Strategy
RNA-Seq
Sequencing Library
Paired
Experiment Type
Control
Replicate Number
1
Total Replicates
1
Merged replicated
1
Library Name
lib5
Selection Method
cDNA
Number of run
1
Spots No
82084398
Bases no
16.4
Spot Length
202
Submitted By
Dr. Ajit Shasany
Affliated Institute
CSIR-Central Institute Of Medicinal And Aromatic Plants
Country
India
State
Uttar Pradesh
City
Lucknow
SRA (NCBI) Project ID
SRA (NCBI) Experiment ID
SRA (NCBI) Sample ID
SRA (NCBI) Run ID
Other Related Entries
| Project ID | Experiment ID | Plant Name | Sample/Tissue | Exp. Type | Replicate No. | Total Replicates No. | Merged Assembly (Replicates) | DEGs (Pair) |
|---|---|---|---|---|---|---|---|---|
| PTP018 | PTE053 | Mentha Arvensis | Leaf | Control | 1 | 1 | 1 | - |
Reference/Publication Details
| Sr. No | Publication details |
|---|---|
| 1 | Akhtar, M.Q., Qamar, N., Yadav, P., Kulkarni, P., Kumar, A. and Shasany, A.K. (2017), Comparative glandular trichome transcriptome-based gene characterization reveals reasons for differential (−)-menthol biosynthesis in Mentha species. Physiol Plantarum, 160: 128-141. https://doi.org/10.1111/ppl.12550 |