Plant Classification
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| Kingdom | Plantae | |
| Phylum | Streptophyta | |
| Class | Magnolipsida | |
| Order | Lamiales | |
| Family | Lamiaceae | |
| Genus | Mentha | |
| Species | arvensis | |
| Variety | CIM-Saksham |
Transcriptome Details
Sample Tissue
Leaf
Line/Chemotype/Cultivar
CIM-Saksham
Study Title
Mentha arvensis isolate:Leaf Samples | cultivar:Saksham Transcriptome or Gene expression
Description
Differential gene expression of M.arvensis in developmental stages.
Sequencing Platform
Illumina HiSeq 2000
Sequencing Strategy
RNA-Seq
Sequencing Library
Paired
Experiment Type
Control
Replicate Number
1
Total Replicates
1
Merged replicated
1
Library Name
SO_4458
Selection Method
RT-PCR
Number of run
1
Spots No
25890310
Bases no
7.8
Spot Length
302
Submitted By
Dr. Sunita Singh Dhawan
Affliated Institute
CSIR-CIMAP
Country
India
State
Uttar Pradesh
City
Lucknow
SRA (NCBI) Project ID
SRA (NCBI) Experiment ID
SRA (NCBI) Sample ID
SRA (NCBI) Run ID
Other Related Entries
| Project ID | Experiment ID | Plant Name | Sample/Tissue | Exp. Type | Replicate No. | Total Replicates No. | Merged Assembly (Replicates) | DEGs (Pair) |
|---|---|---|---|---|---|---|---|---|
| PTP019 | PTE054 | Mentha Arvensis | Leaf | Control | 1 | 1 | 1 | - |
| PTP019 | PTE055 | Mentha Arvensis | Leaf | Control | 1 | 1 | 1 | - |
Reference/Publication Details
| Sr. No | Publication details |
|---|---|
| 1 | Anand Mishra, Pankhuri Gupta, R.K. Lal, Sunita Singh Dhawan (2021). Assessing and integrating the transcriptome analysis with plant development, trichomes, and secondary metabolites yield potential in Mentha arvensisL. Plant Physiology and Biochemistry. Volume 162,Pages 517-530. https://doi.org/10.1016/j.plaphy.2021.03.009. |