COCONUT Compound

1-deoxy-D-xylulose 5-phosphate

CNP0343667.1 · C5H11O7P · View on COCONUT ↗

Identifiers

Name1-deoxy-D-xylulose 5-phosphate
IUPAC Name[(2~{R},3~{S})-2,3-dihydroxy-4-oxo-pentyl] dihydrogen phosphate
COCONUT IDCNP0343667.1
CAS190079-18-6
InChIKeyAJPADPZSRRUGHI-RFZPGFLSSA-N
InChIInChI=1S/C5H11O7P/c1-3(6)5(8)4(7)2-12-13(9,10)11/h4-5,7-8H,2H2,1H3,(H2,9,10,11)/t4-,5-/m1/s1
SMILESCC(=O)[C@@H](O)[C@H](O)COP(=O)(O)O

Properties

Molecular FormulaC5H11O7P
Molecular Weight214.11
Exact Mass214.02424
Log P (ALogP)-1.59
TPSA124.29
H-Bond Donors / Acceptors4 / 5
Rotatable Bonds5
Lipinski's Rule of 5 Violations0
QED Drug-likeness0.41
NP-likeness1.60

Classification

NP PathwayCarbohydrates
NP Superclass
NP Class
Chemical SuperclassOrganic oxygen compounds
Chemical ClassOrganooxygen compounds
Chemical SubclassCarbohydrates and carbohydrate conjugates

Reported in GR-MAPs Plants

Arabidopsis thaliana as “Arabidopsis thaliana” in COCONUT

Data from COCONUT (COlleCtion of Open Natural prodUcTs), released under CC0. Chandrasekhar V. et al. COCONUT 2.0: a comprehensive overhaul and curation of the collection of open natural products database. Nucleic Acids Research (2024), doi:10.1093/nar/gkae1063. COCONUT release 2026-10.