FastQCFastQC Report
Thu 1 Apr 2021
SRR2064180_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2064180_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11617581
Sequences flagged as poor quality0
Sequence length101
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCATGTGTTTTAAAAGTAGTAAATATCACAAATCAAACAAACAAAGGTC174450.1501603474940265No Hit
CTGGAATGTTCGTGGGAGCAAGAAGTTTTACAAAATTCACGTGGAGATGG160480.1381354689930718No Hit
CCGGGATTCAGATTTCGATGAGGGTTACACATTGGCCAACATCTCAGCCC122130.10512515471163919No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)